Showing posts with label Louis Pasteur. Show all posts
Showing posts with label Louis Pasteur. Show all posts

Wednesday, May 27, 2009

From the Origin of Species to the origin of infection

This article has just appeared in a special Darwin 200 issue of Microbiology Today, where you can obtain a PDF of this piece and much more besides. But they have given me permission to post it here too, where it benefits from hypertext links for the interested reader.

From the Origin of Species to the origin of infection
2009 marks the bicentenary of the birth of Charles Darwin and the 150th anniversary of the publication of On the Origin of Species by Means of Natural Selection. The impact of Darwin’s theory of evolution by natural selection is felt throughout biology and even beyond it — in disciplines as diverse as computer science and cosmology. Darwin’s theory is widely touted as ‘the best idea anyone ever had’ and arguably ranks as the most influential change in human thought in modern times (although as microbiologists, we may wish to claim that the germ theory of infection is of more practical significance).

What about Darwin and microbiology? Antibiotic resistance is widely cited as a tangible example of Darwinian evolution. But Darwin himself lived through the birth of our discipline, so it is not surprising to learn that there are links between Darwin and the founding fathers of microbiology.

Darwin and natural selection

Charles Darwin was born and schooled in Shrewsbury, an English market town close to the Welsh border. He tried, and ducked out of, a medical education in Edinburgh, then studied at Cambridge with a view to joining the clergy. But his reputation as a naturalist earned him a place on a round- the-world trip on HMS Beagle, which primed him for his revolutionary ideas on evolution. He started to formulate his thoughts on evolution shortly after his return from the Beagle voyage, recording a riot of ideas, sometimes earthy or even vulgar, in a series of notebooks. For inspiration on his ideas of the struggle for existence and natural selection, he drew on the work of Robert Malthus, who had suggested that human populations always eventually out-run the means to sustain them. Darwin outlined his theory in a ‘pencil sketch’ of 1842 and an essay of 1844, but, preoccupied with other work, delayed publication until the late 1850s, when he was spurred into action by the rival work of Alfred Russel Wallace.

In On the Origin of Species by Means of Natural Selection, first published in 1859, Darwin eloquently (and presciently, given its subsequent influence on antibiotic resistance) emphasizes the remarkable power of natural selection:
‘We have seen that man by selection can certainly produce great results, and can adapt organic beings to his own uses, through the accumulation of slight but useful variations, given to him by the hand of Nature. But Natural Selection, as we shall hereafter see, is a power incessantly ready for action, and is as immeasurably superior to man’s feeble efforts, as the works of Nature are to those of Art.’ [link]
Later, in Variation Under Domestication [note: not The Descent of Man as stated in PDF], despite his ignorance of the nature of inheritance, Darwin points out that the variation that is a prerequisite of natural selection originates independently of the selection itself.

In the decades after his death, while Darwin’s ideas of evolutionary change and common ancestry were widely accepted, his principal mechanism for change, natural selection, was not. However, in the mid-20th century, Darwin’s intellectual legacy was reconciled with Mendelian genetics in what is often called ‘The Modern Synthesis’. As part of this reconciliation, bacteria were brought into the broader evolutionary genetic framework, principally through the experiments on the genetics of phage susceptibility published by Salvador Luria and Max Delbrück in 1941. In their famous fluctuation test, Luria and Delbrück confirmed Darwin’s hunch that variation precedes selection, rather than arising in response to it, and thrust bacteria centre stage as biological entities with fully-fledged genetics. A few years later, in 1945, Milislav Demerec repeated the fluctuation test on penicillin resistance in Staphylococcus aureus, showing for the first time the awesome power of natural selection to curtail our biochemical victories over micro-organisms.

Darwin and Pasteur

Shortly after Darwin published The Origin, in Paris, Louis Pasteur performed a series of experiments that demolished the theory of spontaneous generation. Darwin was well aware of the on-going controversy. In 1860, in a letter to his friend Lyell, he refers to the work of Pasteur’s rival Pouchet:
‘I have seen something about the infusorial experiments in Paris: Quatrefage objected to their accuracy. Some old experiments were several years ago tried in Germany with astonishing precautions (air all passed through sulphuric acid & caustic potash) and infusoria never appeared.’
A few years later in 1863, he wrote to the English botanist George Bentham:
‘I am very glad that you are going to allude to Pasteur; I was struck with infinite admiration at his work.’
In disproving spontaneous generation, Pasteur might be seen as undercutting Darwin’s theory of evolution by removing a mechanism for the generation of the first life forms. However, Darwin was sharp enough to realize that the conditions under which life first originated were likely to be quite different from those around today. In 1871, he wrote to his botanist friend Joseph Hooker:
‘It is often said that all the conditions for the first production of a living organism are now present, which could ever have been present. But if (and oh! what a big if!) we could conceive in some warm little pond, with all sorts of ammonia and phosphoric salts, light, heat, electricity, etc., present, that a proteine [sic] compound was chemically formed ready to undergo still more complex changes, at the present day such matter would be instantly devoured or absorbed, which would not have been the case before living creatures were formed.’
As far as I am aware, Pasteur never made any direct reference to Darwin, although he opened his 1864 address to the Sorbonne on spontaneous generation with these expressive lines:
‘Great problems are in question today, keeping every thinking man in suspense: the unity or multiplicity of human races, the creation of man 1,000 years or 1,000 centuries ago; the fixity of species, or the slow and progressive transformation of one species into another…’
Half a century later, an essay in Science magazine concluded:
‘Darwin, master of the organic world sleeps near Newton, master of the inorganic, in the great [Westminster] Abbey, among the most famous of his race. Pasteur rests alone in the chapel of his laboratory … Both rest forever among the immortals. the last half of the nineteenth century may well be called their age “the Age of Darwin and Pasteur”.’

Darwin, Cohn and the origin of infection

Darwin maintained an extensive network of correspondents. Among them was the German Jewish botanist and bacteriologist, Ferdinand Cohn (1828–1898), who is widely recognized as the father of bacterial taxonomy. Cohn was the first to classify bacteria according to their microscopic appearance and the first to describe sporulation in Bacillus. He was instrumental in publishing Robert Koch’s work on Bacillus anthracis.

From 1874 until 1882, Darwin and Cohn maintained a lively correspondence, principally on botany. On 26 September 1876 Darwin writes to invite Cohn and his wife to visit him at Down House. And then, the very next day, Darwin writes to his son Frank, saying that he hopes they will not come! Apparently the subsequent visit was a success. However, for microbiologists, one particular exchange of letters stands out. In January 1878, Cohn writes to Darwin, discussing Koch’s recent discovery of the anthrax bacillus. Darwin’s response is a triumphant celebration of the birth of medical microbiology:
‘I thank you sincerely for your most kind letter and I return your wishes for the New Year with all my heart. Your letter has interested me greatly. Dr Sanderson showed me some admirable photographs on glass by Dr Koch of the Organisms which cause Splenic Fever. But your letter and the valuable work which you have given me make the case much clearer to me. I well remember saying to myself between 20 and 30 years ago, that if ever the origin of any infectious disease could be proved, it would be the greatest triumph to Science; and now I rejoice to have seen the triumph.’ 
Further reading

Darwin, C. (1859). On The Origin of Species By Means of Natural Selection. London: John Murray.

Pallen, M. (2009). The Rough Guide to Evolution. London: Rough Guides.

Creager, A.N.H. (2007). Adaptation or selection? Old issues and new stakes in the postwar debates over bacterial drug resistance. Stud Hist Phil Biol Biomed Sci 38, 159–190.

Sedgwick, W.T. (1923). Darwin and Pasteur: an essay in comparative biography. Science 52, 286.

http://darwin-online.org.uk – The complete works of Charles Darwin online. http://www.darwinproject.ac.uk – Darwin Correspondence Project

Tuesday, April 21, 2009

Darwin, Pasteur, their sleep among the immortals and the need to dig back to primary sources

A couple of weeks ago I wrote a short piece for the magazine Microbiology Today, entitled Darwin; from the origin of species to the origin of infection. Once it has been published in a week or two's time in the May edition of the magazine, I will be able to share the piece in full with you. But today I checked through the proofs, made a few minor alterations and then stumbled across a major problem. 

Primed by all the Darwin misquotes and myths I have encountered, I started to doubt the veracity of an oft-cited quotation from Louis Pasteur that I had used:
"Virulence appears in a new light which cannot but be alarming to humanity; unless nature, in her evolution down the ages (an evolution which, as we now know, has been going on for millions, nay, hundreds of millions of years), has finally exhausted all the possibilities of producing virulent or contagious diseases -- which does not seem very likely."
I first found the quote in Claim CA114.22 in the Index to Creationist Claims on the talk.origins website, but it has been propagated in many places elsewhere. On the face of it, it appears to lend support to the idea that Pasteur accepted Deep Time, one of the pre-requisites for Darwin's Theory of Evolution and rejected Biblical Young Earth Creationism. But something in that parenthetic phrase about "millions, nay, hundreds of millions of years" jarred with me. And of course, the quotation cannot be precisely original, as Pasteur would have written it in French.

Pasteur was clearly aware of the issues of evolution and Deep Time. In his address to the Sorbonne in 1864 on Spontaneous Generation, Pasteur opens with these ponderous tones:
"Mesdames et messieurs. De bien grands problèmes s'agitent aujourd'hui et tiennent tous les esprits en éveil: unité ou multiplicité des races humaines; création de l'homme depuis quelques mille ans ou depuis quelques mille siècles; fixité des espèces, ou transformation lente et progressive des espèces les unes dans les autres....
Ladies and Gentlemen. Great problems are in question today, keeping every thinking man in suspense: the unity or multiplicity of human races, the creation of man one thousand years or one thousand centuries ago; the fixity of species, or the slow and progressive transformation of one species into another...."
But here Pasteur is sitting on the fence, not actually saying what he believed. Aside from the now questionable quotation, I have found no evidence that Pasteur ever said anything about Darwin or Deep Time. 

And so, I chased up the source of the questionable quotation. The Index To Creationist Claims has the source as: "Cuny, Hilaire. 1965. Louis Pasteur: The man and his theories. Translated by P. Evans. London: The Scientific Book Club".

But sadly this work is not available on line (does anyone have a copy?). And in any case, to get at what Pasteur really said, we have to search in French. With my schoolboy Français and a few minutes with Google, I managed to track down the original Pasteur quote as follows:
"Et voilà que la virulence nous apparaît sous un jour nouveau qui ne laisse pas d'être inquiétant pour l'humanité, à moins que la nature, dans son évolution à travers les siècles passés, n'ait déjà rencontré toutes les occasions de production des maladies virulentes ou contagieuses, ce qui est fort invraisemblable."
which is documented on at least two sites:
But look carefully! No mention of millions of years here! Just "siècles passés" or "past centuries". So, where did the parenthetical phrase originate? My guess is that Hilaire Cuny added it to the original French version of his out-of-print biography of Pasteur (Louis Pasteur et le mystere de la vie), written in the 1960s, when Deep Time was well accepted.

And the sting in the tail? An article on the otherwise execrable Young Earth Creationist website Answers in Genesis arrived at a similar conclusion before me:
"The quote from Pasteur given above, without the parenthetical statement, appeared in an article co-authored by Pasteur (Pasteur, Chamberland, and Roux 1881, p. 203). The parenthetical statement was added at a later time by an unknown author."
So, I guess as proponents of evolution we have to be as careful with our use of quotations and take care to avoid the sin of quote-mining, just as we urge the creationists to do!

But before I close, let me share one more discovery with you. While nosing around the potential links between Darwin and Pasteur, I turned up a gem of an article from a 1923 issue of Science Magazine: Darwin and Pasteur: an essay in comparative biography. 

For some reason, Science magazine still insists that non-subscribers should pay for the article, even though it is now out of copyright. It is rather too long to reproduce in full here, but if anyone wants the whole text, let me know and I will supply it.

The editorial note that opens the essay is particularly poignant:
"The accompanying essay was left uncompleted by the late William Thompson Sedgwick [first president of what was to become the American Society for Microbiology] of the Massachusetts Institute of Technology, when he died, as we all wish to, quickly and before his work was finished. Such an essay may be not only especially timely in this Pasteur anniversary, but may also be useful at a time when men of faith are attacked by men of ignorance and credulity.-G. J. P"
And the closing paragraphs give you a flavour of the writing—nobody writes articles like this any more!
"Both Darwin and Pasteur were fortunate in bringing out their great ideas at the right time. (Agnosticism in medicine, agnosticism in cosmology). The world was tired of supernaturalism and ready for naturalism. It was tired of confusion and ignorance concerning disease, and eagerly embraced the germ theory. 
The fame of Darwin has grown greater with the passing years. Darwinism has already become merged and may one day become submerged in the broader doctrine of evolution, of which it was the forerunner. Pasteur's name, curiously enough, is popularly best known in pasteurization, a process of applied science employed long before his day under other names and no name, but first made rational and scientific by him. But Pasteur's original ideas and discoveries have spread like an infection until today they cover the earth.
Darwin, the master of the organic world, sleeps near Newton, the master of the inorganic, in the great Abbey, among the most famous of his race. Pasteur rests alone in the chapel of his laboratory. The world claimed Darwin's body to place among its great ones. Science kept Pasteur's for its own. Both dwell forever among the immortals. The last half of the nineteenth century may well be called their age-the Age of Darwin and Pasteur."